Imaging analysis pipeline in collaboration with the Ihrie lab.
Coming soon
Looking for a crashcourse in cytometry data analysis? You've come to the right place. Below you'll find a series of tutorial applications designed to introduce cytometry data analysis fundamentals for first-time users (or experienced scientists looking to brush up!).
Steps in data analysis pipelines
Coming Soon
How to prepare your data
Coming Soon
CytoLab is a branch of the Irish Lab, and builds data analysis and educational resources for the cytometry scientific community. Our biggest project to date is the CytoMEM package (now on Bioconductor), which creates marker enrichment scores for cell populations in cytometry datasets. We’ve also created the T-REX and RAPID analysis pipelines, and the cytometry data analysis tutorials you’ll find on this page.
cass.mayeda@vanderbilt.edu
Data visualization, R shiny, teaching
jonathan.irish@vanderbilt.edu
Single cell cytometry, cell signaling, immunology & cancer research
